The detailed information of tRNA gene sequence


Sequence ID>C161000085
Genome IDAP013035
Search identical group
Phylum/ClassAquificota
SpeciesThermosulfidibacter takaii ABI70S6 [AP013035]
Start position on genome 1615412
End posion on genome 1615315
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cttccttctc
tRNA gene sequence 
GGAAGGGCGTGAGGGCTGGTGCCCTCCCTGGACTTCAAATCCAGTGGGACCGTCGGAAAG
GGCGGTCCGGTGGGTTCGATTCCCATGCCCTTCCGCCA
Downstream region at tRNA end position 
ttgttttcta
Secondary structure (Cloverleaf model)
>C161000085	SeC(p)	TCA
                   c      GCCA ttgttttcta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T T
                    G     T A C C C     A
      T C G        T      + | | | |     G
    G       G G A G       G T G G G     C
    G       | | | |                 T T
    T       C C T C
      G C          C     TGGGACCGTCGGAAAGGGCGGTCCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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