The detailed information of tRNA gene sequence


Sequence ID>C161001531
Genome IDAP014821
Search identical group
Phylum/ClassCyanobacteriota
SpeciesGeminocystis sp. NIES-3709 [AP014821]
Start position on genome 359045
End posion on genome 359131
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atctgtacaa
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTTGAATGCGGCAGTCTCGAAAATTGTTAAGGTGTCAAAACCT
TCGAGGGTTCAAATCCCTCTCTCTCCGtta
Downstream region at tRNA end position 
ttttcaaatt
Secondary structure (Cloverleaf model)
>C161001531	Ser	CGA
                   a      Gtta ttttcaaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TAAGGTGTCAAAACCTTC
                    G + T
                    C - G
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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