The detailed information of tRNA gene sequence


Sequence ID>C161001651
Genome IDAP014854
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesBlastochloris viridis DSM 133 [AP014854]
Start position on genome 3340383
End posion on genome 3340456
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccgctcggat
tRNA gene sequence 
GGCCTCGTGGCGGAATGGTTACGCAGCAGACTGCAAATCTGTGAATCCCGGTTCGATTCC
GGGCGAGGCCTCCA
Downstream region at tRNA end position 
atctcctctt
Secondary structure (Cloverleaf model)
>C161001651	Cys	GCA
                   t      TCCA atctcctctt
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     G G G C C     A
        A A        G      | | | | |     G
      T     G G C G       C C C G G     C
      G       | | |                 T T
      G     A C G C
        T T        A     GAAT
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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