The detailed information of tRNA gene sequence


Sequence ID>C161001656
Genome IDAP014854
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesBlastochloris viridis DSM 133 [AP014854]
Start position on genome 3531938
End posion on genome 3531862
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgtcgcccgg
tRNA gene sequence 
AGGAGTGTAGCTCAACTGGCTAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGAG
TCCCTCCACTCCTGCCA
Downstream region at tRNA end position 
gcctcggccc
Secondary structure (Cloverleaf model)
>C161001656	Trp	CCA
                   g      GCCA gcctcggccc
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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