The detailed information of tRNA gene sequence


Sequence ID>C161001678
Genome IDAP014854
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesBlastochloris viridis DSM 133 [AP014854]
Start position on genome 153953
End posion on genome 153869
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ccgtgtcgtt
tRNA gene sequence 
GCGGGCGTGGCGGAACTGGTAGACGCGCTGGATTTAGGTTCCAGTGACGAAAGTCGTGGG
GGTTCGAGCCCCTCCGCCCGCACCA
Downstream region at tRNA end position 
tctcccgcga
Secondary structure (Cloverleaf model)
>C161001678	Leu	TAG
                   t      ACCA tctcccgcga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          C G
                    T     C T C C C     A
      C A A        G      | + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGACGAAAGTCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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