The detailed information of tRNA gene sequence


Sequence ID>C161002281
Genome IDAP014945
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesCaldimicrobium thiodismutans TF1 [AP014945]
Start position on genome 125625
End posion on genome 125701
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaataaggt
tRNA gene sequence 
AGGGCAGTAGCTCAACTTGGCAGAGCATCGGACTCCAAATCCGAAGGCTGGGGGTTCAAG
TCCCTCCTGCCCTGCCA
Downstream region at tRNA end position 
tttttattat
Secondary structure (Cloverleaf model)
>C161002281	Trp	CCA
                   t      GCCA tttttattat
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     AGGCT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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