The detailed information of tRNA gene sequence


Sequence ID>C161002293
Genome IDAP014945
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesCaldimicrobium thiodismutans TF1 [AP014945]
Start position on genome 1046590
End posion on genome 1046682
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttttttaaat
tRNA gene sequence 
GGAGGCGTGAGGGGGCTGGTGCCCCTCCCGGGCTTCAAACCCGGTGCACCCCAAAAAGGG
GTGGGTGGGTTCAATTCCCATACGCCTCCGCCA
Downstream region at tRNA end position 
taaggataaa
Secondary structure (Cloverleaf model)
>C161002293	SeC	TCA
                   t      GCCA taaggataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T T
                    G     T A C C C     A
      T C G        A      + | | | |     A
    G       G G G G       G T G G G     C
    G       | | | +                 T T
    T       C C C T
      G C          C     TGCACCCCAAAAAGGGGTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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