The detailed information of tRNA gene sequence


Sequence ID>C161003146
Genome IDCP004146
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorrelia hermsii YOR [CP004146]
Start position on genome 485967
End posion on genome 486055
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgttggtttT
tRNA gene sequence 
GGAGAGATGGCCGAGCGGCTGAAGGCGCACGCTTGGAAAGCGTGTATACATGAAAATGTA
TCATGGGTTCGAATCCCATTTTCTCCGGtt
Downstream region at tRNA end position 
cctaggatcc
Secondary structure (Cloverleaf model)
>C161003146	Ser	GGA
                   T      GGtt cctaggatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     A - T          T A
                    T     T A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       A T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACATGAAAATGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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