The detailed information of tRNA gene sequence


Sequence ID>C161003207
Genome IDCP004267
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorrelia crocidurae DOU [CP004267]
Start position on genome 484290
End posion on genome 484379
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtggattaa
tRNA gene sequence 
GGAGAGATGCCAGAGTGGTCGAATGGGGCTTCCTGCTAAGAAGTTGTCCTTTTAAAAAGG
GGACCATGGGTTCGAATCCCATTCTCTCCGtag
Downstream region at tRNA end position 
agatttttat
Secondary structure (Cloverleaf model)
>C161003207	Ser	GCT
                   a      Gtag agatttttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       A T G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGTCCTTTTAAAAAGGGGACC
                    G + T
                    C - G
                    T - A
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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