The detailed information of tRNA gene sequence


Sequence ID>C161003230
Genome IDCP004267
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorrelia crocidurae DOU [CP004267]
Start position on genome 447571
End posion on genome 447496
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gactattttT
tRNA gene sequence 
GGGGGTTTAGCTCAGTTGGCTAGAGCATCGGCTTTGCAAGCCGAGGGTCGAGGGTTCGAG
TCCCTCAACCTCCATtt
Downstream region at tRNA end position 
attttaggtc
Secondary structure (Cloverleaf model)
>C161003230	Ala	TGC
                   T      ATtt attttaggtc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     T - A          T G
                    T     C T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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