The detailed information of tRNA gene sequence


Sequence ID>C161003448
Genome IDCP005385
Search identical group
Phylum/ClassDeinococcota
SpeciesMeiothermus ruber DSM 1279 [CP005385]
Start position on genome 640144
End posion on genome 640220
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcgccagtgt
tRNA gene sequence 
GGGCCGTTAGCTCAGCCCGGTAGAGCACTCGTCTCCAAAACGAGGTGTCGGAGGTTCGAA
TCCTTCACGGCCCGCCA
Downstream region at tRNA end position 
gcatcgcaaa
Secondary structure (Cloverleaf model)
>C161003448	Trp	CCA
                   t      GCCA gcatcgcaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     C T T C C     A
      C G A        A      | + | | |     G
    C       C T C G       G G A G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        A     GTGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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