The detailed information of tRNA gene sequence


Sequence ID>C161003454
Genome IDCP005385
Search identical group
Phylum/ClassDeinococcota
SpeciesMeiothermus ruber DSM 1279 [CP005385]
Start position on genome 1563038
End posion on genome 1563127
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgctgtcct
tRNA gene sequence 
GGAGGGATGGCTGAGTGGTTGAAAGCGGCGGTCTTGAAAACCGTTGTAGACGCAAGTCTA
CCGGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
ggctatttca
Secondary structure (Cloverleaf model)
>C161003454	Ser	TGA
                   t      GCCA ggctatttca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TGTAGACGCAAGTCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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