The detailed information of tRNA gene sequence


Sequence ID>C161003518
Genome IDCP005680
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorrelia hermsii MTW [CP005680]
Start position on genome 409647
End posion on genome 409574
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctaaagtgaT
tRNA gene sequence 
AGGTCAGTAGTTCAAGGGTGGAACGGCGGTCTCCAAAACCGCATGTTGGGGGTTCGAGTC
CCTCCTGACCTGTtg
Downstream region at tRNA end position 
tctgtattgt
Secondary structure (Cloverleaf model)
>C161003518	Trp	CCA
                   T      GTtg tctgtattgt
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
        A A        A      | + | | |     G
      G     C T T G       G G G G G     C
      G     | | | |                 T T
      G     G A A C
        T G        G     ATGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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