The detailed information of tRNA gene sequence


Sequence ID>C161003543
Genome IDCP005706
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorrelia hermsii YBT [CP005706]
Start position on genome 643302
End posion on genome 643229
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tattgcaaga
tRNA gene sequence 
CGCAGGGTGGAGCAGTTTGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGTAGGTTCAAG
TCCTACCCCTGCTAttt
Downstream region at tRNA end position 
gaagatgtga
Secondary structure (Cloverleaf model)
>C161003543	Met	CAT
                   a      Attt gaagatgtga
                     C   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     C A T C C     A
      T G A        G      | | | | |     A
    T       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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