The detailed information of tRNA gene sequence


Sequence ID>C161003624
Genome IDCP005851
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorrelia parkeri SLO [CP005851]
Start position on genome 472931
End posion on genome 473007
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agactttttT
tRNA gene sequence 
GGGGGTTTAGCTCAGTTGGTTTAGAGCATCGGCTTTGCAAGCCGGGGGTCAAGGGTTCGA
ATCCCTTAACCTCCATtt
Downstream region at tRNA end position 
gtttattgta
Secondary structure (Cloverleaf model)
>C161003624	Ala	TGC
                   T      ATtt gtttattgta
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     T - A          T A
                    T     T T C C C     A
    T T G A        A      | | | | |     G
  G         C T C G       A A G G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          A     GGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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