The detailed information of tRNA gene sequence


Sequence ID>C161005076
Genome IDCP007141
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [CP007141]
Start position on genome 274269
End posion on genome 274344
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctgtggttac
tRNA gene sequence 
GGGCTCGTAGCTCAGTAGGTAGAGCGCCCGGCTCATAACCGGGTGGTCGGGGGTTCGAAG
CCTCCCGAGCCCACCA
Downstream region at tRNA end position 
agaagggagc
Secondary structure (Cloverleaf model)
>C161005076	Met	CAT
                   c      ACCA agaagggagc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          G A
                    T     C C T C C     A
      T G A        A      | | + | |     G
    A       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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