The detailed information of tRNA gene sequence


Sequence ID>C161005081
Genome IDCP007141
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [CP007141]
Start position on genome 440185
End posion on genome 440259
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
gcaccagatt
tRNA gene sequence 
GCGGGCGTAGCTCAGCGGTAGAGCGTCTGCTTGCCAAGCAGAAGGTCGCGGGTTCGAAAC
CCGTCGCCCGCTCCA
Downstream region at tRNA end position 
agataaaccc
Secondary structure (Cloverleaf model)
>C161005081	Gly	GCC
                   t      TCCA agataaaccc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          A A
                    T     T G C C C     A
        G A        A      + | | | |     G
      C     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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