The detailed information of tRNA gene sequence


Sequence ID>C161005083
Genome IDCP007141
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [CP007141]
Start position on genome 1151987
End posion on genome 1152061
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cttgcgagct
tRNA gene sequence 
GGGTGCGTAGCTCAGAGGGAGAGCGCTTCCCTCACGAGGAAGAGGCCGCAGGTTCGATTC
CTGCCGCACCCACCA
Downstream region at tRNA end position 
ttttatccca
Secondary structure (Cloverleaf model)
>C161005083	Val	CAC
                   t      ACCA ttttatccca
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C          T T
                    T     C G T C C     A
        G A        A      | | | | |     G
      A     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       G
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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