The detailed information of tRNA gene sequence


Sequence ID>C161005090
Genome IDCP007141
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [CP007141]
Start position on genome 1961395
End posion on genome 1961471
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gcccgctcca
tRNA gene sequence 
GCGCCCGTAGCTCAATAGGATAGAGCATCGGACTTCTAATCCGAGGGTTGTGGGTTCGAC
TCCCGCCGGGCGCGCCA
Downstream region at tRNA end position 
gcgtggtgac
Secondary structure (Cloverleaf model)
>C161005090	Arg	TCT
                   a      GCCA gcgtggtgac
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     C G C C C     A
      T A A        A      | + | | |     G
    A       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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