The detailed information of tRNA gene sequence


Sequence ID>C161005098
Genome IDCP007141
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [CP007141]
Start position on genome 2137666
End posion on genome 2137590
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tgtattggct
tRNA gene sequence 
CAGGGGGTAGTTCAGTTGGCCAGAACGCCGGAATCGGGGTCCGGAGGTCGAGGGTTCAAG
TCCCTCCCCCCTGACCA
Downstream region at tRNA end position 
tatttcagac
Secondary structure (Cloverleaf model)
>C161005098	Pro	CGG
                   t      ACCA tatttcagac
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | | | | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      C C A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  A       G
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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