The detailed information of tRNA gene sequence


Sequence ID>C161005100
Genome IDCP007141
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [CP007141]
Start position on genome 2008415
End posion on genome 2008341
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tagtaaatgt
tRNA gene sequence 
GGCCCCATAGGATAACGGCTAGTCCATCGGATTCTCAGTCCGAAGGTCGGGGTTCGACTC
CCCGTGGGGCTACCA
Downstream region at tRNA end position 
gactttatag
Secondary structure (Cloverleaf model)
>C161005100	Glu	CTC
                   t      ACCA gactttatag
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T C
                    T     G C C C C     A
      C A A        A      | | | | |     G
    G       T A G G       C G G G G     C
    G       + | | |                 T T
    C       G T C C
      T A          A     AGGT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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