The detailed information of tRNA gene sequence


Sequence ID>C161005111
Genome IDCP007141
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [CP007141]
Start position on genome 362867
End posion on genome 362791
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttgagacggt
tRNA gene sequence 
GCAGGCGTAGCTTCAAGCGGTGGAGCGCCGCCTTGGTAAGGCGGAGGGTGTGGGTTCGAG
TCCCACCGCCTGCTCCA
Downstream region at tRNA end position 
ttttatttct
Secondary structure (Cloverleaf model)
>C161005111	Thr	GGT
                   t      TCCA ttttatttct
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      A A C        A      | | | | |     G
    G       T T C G       G T G G G     C
    C       + | | |                 T T
    G       G A G C
      G T G        G     AGGGT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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