The detailed information of tRNA gene sequence


Sequence ID>C161005116
Genome IDCP007141
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [CP007141]
Start position on genome 83334
End posion on genome 83259
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
agggtcacgg
tRNA gene sequence 
GCCAGCGTAGCTCAACCGGCAGAGCGGCTGACTTGTAATCAGCAGGTTGGGGGTTCGAGT
CCCTTCGCTGGCTCCA
Downstream region at tRNA end position 
acccaaactg
Secondary structure (Cloverleaf model)
>C161005116	Thr	TGT
                   g      TCCA acccaaactg
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      C A A        A      + + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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