The detailed information of tRNA gene sequence


Sequence ID>C161005121
Genome IDCP007141
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 = NBRC 106472 [CP007141]
Start position on genome 21919
End posion on genome 21844
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
accatggtgt
tRNA gene sequence 
GGGCCGTTAGCTCAGCAGGTAGAGCACCTGACTCTTAATCAGGGGGTCGCAGGTTCGAAT
CCTGCACGGCCCACCA
Downstream region at tRNA end position 
gagtgaaagt
Secondary structure (Cloverleaf model)
>C161005121	Lys	CTT
                   t      ACCA gagtgaaagt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    A       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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