The detailed information of tRNA gene sequence


Sequence ID>C161016838
Genome IDCP007440
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodoplanes sp. Z2-YC6860 [CP007440]
Start position on genome 4859773
End posion on genome 4859698
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cctgacccgc
tRNA gene sequence 
AGGAGTGTAGCTCAATGGCTAGAGCACCGGTCTCCAAAACCGGGGGTTGTAGGTTCGAGT
CCTACCACTCCTGCCA
Downstream region at tRNA end position 
gtaattatct
Secondary structure (Cloverleaf model)
>C161016838	Trp	CCA
                   c      GCCA gtaattatct
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C A T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    C       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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