The detailed information of tRNA gene sequence


Sequence ID>C161017264
Genome IDCP007548
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. endemicum str. Bosnia A [CP007548]
Start position on genome 697254
End posion on genome 697326
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cgcggtgtgc
tRNA gene sequence 
GCCGTTGTAGCTCAGTCGGTAGAGCAAAGGACTGAAAATCCTTGTGTCGACAGTTCGATT
CTGTCCGACGGCAatg
Downstream region at tRNA end position 
ctgccgccct
Secondary structure (Cloverleaf model)
>C161017264	Phe	GAA
                   c      Aatg ctgccgccct
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     T + G
                     G - C          T T
                    T     C T G T C     A
      T G A        A      | | | | |     G
    C       C T C G       G A C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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