The detailed information of tRNA gene sequence


Sequence ID>C161028039
Genome IDCP010558
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum Chicago Population [CP010558]
Start position on genome 1006954
End posion on genome 1006882
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gggcctgcgc
tRNA gene sequence 
GCCAACTTAGCTCACCTGGCAGAGCAGCACCCTCGTAACGTGCAGGTACCCGGTTCGAGC
CCGGGAGTTGGCTttc
Downstream region at tRNA end position 
tgtttggcgt
Secondary structure (Cloverleaf model)
>C161028039	Thr	CGT
                   c      Tttc tgtttggcgt
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     C - G
                     T - A          C G
                    T     G G G C C     A
      C C A        A      | | | | |     G
    T       C T C G       C C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTA
                    G - C
                    C - G
                    A - T
                    C - G
                    C   C
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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