The detailed information of tRNA gene sequence


Sequence ID>C161028135
Genome IDCP010560
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum Nichols Houston [CP010560]
Start position on genome 599220
End posion on genome 599149
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aggggtcctc
tRNA gene sequence 
GGCGCCGTGCCCAAGTGGTAAGGGAGAGGTCTGCAAAACCTTTATGCATCAGTTCGATTC
TGATCGGCGCCTtcg
Downstream region at tRNA end position 
ttcggcctgc
Secondary structure (Cloverleaf model)
>C161028135	Cys	GCA
                   c      Ttcg ttcggcctgc
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T A G T C     A
        G A        G      | | | | |     G
      T     A C C C       A T C A G     C
      G       | | |                 T T
      G     A G G G
        T A        A     TATGC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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