The detailed information of tRNA gene sequence


Sequence ID>C161028198
Genome IDCP010562
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum UW074B [CP010562]
Start position on genome 525090
End posion on genome 525172
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ttgttcgttt
tRNA gene sequence 
GGGGAGTTTCCCGAGTGGTCAAAGGGAGCAGACTGTAAATCTGTTGGCGTTGTCTTCCAA
GGTTCGAATCCTTGACTCCCCACtt
Downstream region at tRNA end position 
tcgtcttccg
Secondary structure (Cloverleaf model)
>C161028198	Tyr	GTA
                   t      ACtt tcgtcttccg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T T C C     A
      T G A        T      | | | | |     G
    G       G C C C       C A A G G     C
    G         | | |                 T T
    T       A G G G
      C A A        A     TGGCGTTGTCTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.-

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