The detailed information of tRNA gene sequence


Sequence ID>C161028355
Genome IDCP010565
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum UW254B [CP010565]
Start position on genome 644086
End posion on genome 644012
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tttgcgtgca
tRNA gene sequence 
CGGGTGGTAGCGCAGTGGTAGCGCGCTCGGTTCGGGACTGAGAGGTCGGGGGTTCAAATC
CCCCTCGCCCGACCA
Downstream region at tRNA end position 
tcgccgttcc
Secondary structure (Cloverleaf model)
>C161028355	Pro	CGG
                   a      ACCA tcgccgttcc
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     G + T          T A
                    T     C C C C C     A
        G A        A      | | | | |     A
      T     C G C G       G G G G G     C
      G     | | | |                 T T
      G     G C G C
        T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G + T
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.-

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