The detailed information of tRNA gene sequence


Sequence ID>C161028696
Genome IDCP010822
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus aquaticus Y51MC23 [CP010822]
Start position on genome 1523261
End posion on genome 1523187
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cctaaggcct
tRNA gene sequence 
GGGGCGGTAGCTCAGAGGGAGAGCACCCGCCTTGCAAGCGGGAGGTCGGGGGTTCAAATC
CCCCCCGCTCCACCA
Downstream region at tRNA end position 
gcgcagggac
Secondary structure (Cloverleaf model)
>C161028696	Ala	TGC
                   t      ACCA gcgcagggac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C C C C C     A
        G A        A      | | | | |     A
      A     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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