The detailed information of tRNA gene sequence


Sequence ID>C161030404
Genome IDCP010969
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia conorii subsp. raoultii Khabarovsk [CP010969]
Start position on genome 12741
End posion on genome 12665
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gagtatatac
tRNA gene sequence 
GGCCACGTAGCTCAGTCGGTAGAAGCAAAGGACTGAAAATCCTTGTGTCGTTGGTTCAAT
TCCAACCGTGGCCACCA
Downstream region at tRNA end position 
ccattcctta
Secondary structure (Cloverleaf model)
>C161030404	Phe	GAA
                   c      ACCA ccattcctta
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T T
                    T     C A A C C     A
      T G A        A      | | | | |     A
    C       C T C G       G T T G G     C
    G         | | |                 T T
    G       A A G C
      T A G        A     GTGTC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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