The detailed information of tRNA gene sequence


Sequence ID>C161033237
Genome IDCP011270
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctomyces sp. SH-PL14 [CP011270]
Start position on genome 1429075
End posion on genome 1429162
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgccccaccc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGCCGAATGCGCCGGTCTCGAAAACCGGTATACCCGCAAGGGTA
TCGAGAGTTCGAATCTCTCCCTCTCCGCtc
Downstream region at tRNA end position 
cttctttcag
Secondary structure (Cloverleaf model)
>C161033237	Ser	CGA
                   c      GCtc cttctttcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G A G     C
    G         | | |                 T T
    C       A T G C
      C G A        G     TATACCCGCAAGGGTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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