The detailed information of tRNA gene sequence


Sequence ID>C161033318
Genome IDCP011271
Search identical group
Phylum/ClassPlanctomycetota
SpeciesGemmata sp. SH-PL17 [CP011271]
Start position on genome 4784538
End posion on genome 4784627
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtcagtattt
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGCGTCGGTCTCGAAAACCGATATGCCCGCAAGGGCA
TCGAGGGTTCGAATCCCTCCCTCTCCGCTA
Downstream region at tRNA end position 
tccaacccgc
Secondary structure (Cloverleaf model)
>C161033318	Ser	CGA
                   t      GCTA tccaacccgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TATGCCCGCAAGGGCATC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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