The detailed information of tRNA gene sequence


Sequence ID>C161033337
Genome IDCP011271
Search identical group
Phylum/ClassPlanctomycetota
SpeciesGemmata sp. SH-PL17 [CP011271]
Start position on genome 8243825
End posion on genome 8243741
Amino Acid Pseudo
Anticodon CGA
Upstream region at tRNA start position 
ccttcatgcG
tRNA gene sequence 
GAGGGACTAGCCGACCGGCGACGGCACCCGTCTCGAAAACGGGCGAGCGACGAGTCTTGG
GGGTTCAACTCCCCCTCCTTCCGCt
Downstream region at tRNA end position 
tacggccccg
Secondary structure (Cloverleaf model)
>C161033337	Pseudo	CGA
                   G      CGCt tacggccccg
                     G - C
                     A - T
                     G + T
                     G - C
                     G - C
                     A - T
                     C   C          C A
                    T     C C C C T     A
      C C A        A        | | | +     C
    G       G C C G       T G G G G     T
    G       | | | |                 G T
    C       C G G C
      G A          A     CGAGCGACGAGTCT
                    C - G
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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