The detailed information of tRNA gene sequence


Sequence ID>C161033360
Genome IDCP011271
Search identical group
Phylum/ClassPlanctomycetota
SpeciesGemmata sp. SH-PL17 [CP011271]
Start position on genome 1242915
End posion on genome 1242821
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aacaagcctt
tRNA gene sequence 
GGGAGCGTTTGCACAACTGGTGTTGGCCCAGGTCTTCAAAACCTGTGGCGGGTGTGAGCA
ACGCTCGCTGTCGGTTCGATTCCGATACGCTCCCGttg
Downstream region at tRNA end position 
ttggttcaga
Secondary structure (Cloverleaf model)
>C161033360	SeC(p)	TCA
                   t      Gttg ttggttcaga
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T T
                    T     T A G C C     A
      C A A        T      + | | | |     G
    T       C A C G       G T C G G     C
    G           | |                 T T
    G       T G G C
      T G T        C     TGGCGGGTGTGAGCAACGCTCGCT
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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