The detailed information of tRNA gene sequence


Sequence ID>C161033379
Genome IDCP011272
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPirellula sp. SH-Sr6A [CP011272]
Start position on genome 6055070
End posion on genome 6055145
Amino Acid Pseudo
Anticodon GTT
Upstream region at tRNA start position 
agaaacatat
tRNA gene sequence 
TCCGGTGGGTCCTGTGTTGGTACGGGAAGGCGACTGTTAATCGCCCAGACGCAGGTTCGA
TTCCTGCTGCCGGAGCtt
Downstream region at tRNA end position 
tttatgtgga
Secondary structure (Cloverleaf model)
>C161033379	Pseudo	GTT
                   t      GCtt tttatgtgga
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     G + T          T T
                    G     C G T C C     A
    T G T G        G      | | | | |     G
  T         T C C T       G C A G G     C
  G         + | | |                 T T
  G         G G G A
    T A C          A     CAGAC
                    G - C
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.-

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