The detailed information of tRNA gene sequence


Sequence ID>C161033387
Genome IDCP011272
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPirellula sp. SH-Sr6A [CP011272]
Start position on genome 6056556
End posion on genome 6056639
Amino Acid Pseudo
Anticodon CAG
Upstream region at tRNA start position 
actacttaat
tRNA gene sequence 
CACGATGTGGTGAAACTGGTAGACACGCGATGCTCAGAACGTCGTGCCATCAAGGCGTAG
GAGTTCGACTCTCCTCTTCGTGACtt
Downstream region at tRNA end position 
tctcattgca
Secondary structure (Cloverleaf model)
>C161033387	Pseudo	CAG
                   t      ACtt tctcattgca
                     C - G
                     A - T
                     C - G
                     G - C
                     A - T
                     T   T
                     G - C          T C
                    T     T C C T C     A
      C A A        G      | | | | |     G
    T       A G T G       A G G A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCCATCAAGGCGT
                    C - G
                    G - C
                    A - T
                    T + G
                    G - C
                  C       A
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.-

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