The detailed information of tRNA gene sequence


Sequence ID>C161033394
Genome IDCP011272
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPirellula sp. SH-Sr6A [CP011272]
Start position on genome 5718328
End posion on genome 5718241
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacatgggtc
tRNA gene sequence 
GGATGGGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGGAGTAGTCGTAAGGCTA
CCGTGGGTTCGAATCCCTCCCCATCCGCtt
Downstream region at tRNA end position 
ttttgtgcta
Secondary structure (Cloverleaf model)
>C161033394	Ser	TGA
                   c      GCtt ttttgtgcta
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      |   | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      T T A        A     AGTAGTCGTAAGGCTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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