The detailed information of tRNA gene sequence


Sequence ID>C161033395
Genome IDCP011272
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPirellula sp. SH-Sr6A [CP011272]
Start position on genome 5600781
End posion on genome 5600691
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcctgtatT
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCTAAAGCACCGGATTGCTAATTCGGCGTAGGGTTAACTCCT
TACCGCAGGTTCGAATCCTGTCCTCTCCGTtg
Downstream region at tRNA end position 
taacgactgg
Secondary structure (Cloverleaf model)
>C161033395	Ser	GCT
                   T      GTtg taacgactgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         | | |                 T T
    T       A A G C
      C T A        A     CGTAGGGTTAACTCCTTACC
                    C - G
                    C - G
                    G - C
                    G + T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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