The detailed information of tRNA gene sequence


Sequence ID>C161035834
Genome IDCP011448
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella pertussis B3921 [CP011448]
Start position on genome 1871138
End posion on genome 1871230
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgactctttt
tRNA gene sequence 
GGAGATGTGCCCGAGAGGCTGAAGGGGCTCCCCTGCTAAGGGAGTATGTGGCTAAAAACT
GCATCGTGGGTTCGAATCCCACCATCTCCGCCA
Downstream region at tRNA end position 
aagatcaaaa
Secondary structure (Cloverleaf model)
>C161035834	Ser	GCT
                   t      GCCA aagatcaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G T G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TATGTGGCTAAAAACTGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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