The detailed information of tRNA gene sequence


Sequence ID>C161040204
Genome IDCP012156
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHyphomonadaceae bacterium UKL13-1 [CP012156]
Start position on genome 1394627
End posion on genome 1394703
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tcgcatgtgt
tRNA gene sequence 
GCCGTGGTAGCTCAGTTGGTTAGAGCGCCAGATTGTGGCTCTGGAGGTCAGCGGTTCAAT
TCCACTTCACGGTACCA
Downstream region at tRNA end position 
tgcgagtttt
Secondary structure (Cloverleaf model)
>C161040204	His	GTG
                   t      ACCA tgcgagtttt
                     G + T
                     C - G
                     C - G
                     G - C
                     T - A
                     G - C
                     G + T          T T
                    T     T C A C C     A
      T G A        A      | |   | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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