The detailed information of tRNA gene sequence


Sequence ID>C161040214
Genome IDCP012156
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHyphomonadaceae bacterium UKL13-1 [CP012156]
Start position on genome 1939931
End posion on genome 1939856
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggcgcgcttt
tRNA gene sequence 
AGGGGTTTAGCTCAGCTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGGGTTCGAGT
CCCTCAGCCCCTGCCA
Downstream region at tRNA end position 
ggcgcgggac
Secondary structure (Cloverleaf model)
>C161040214	Trp	CCA
                   t      GCCA ggcgcgggac
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A          T G
                    T     C T C C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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