The detailed information of tRNA gene sequence


Sequence ID>C161040216
Genome IDCP012156
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHyphomonadaceae bacterium UKL13-1 [CP012156]
Start position on genome 1864075
End posion on genome 1863999
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aggaaacagc
tRNA gene sequence 
GCGGGCGTAGCTCAGTCGGTTAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCGCTCGCGCCA
Downstream region at tRNA end position 
ttcctagccc
Secondary structure (Cloverleaf model)
>C161040216	Asp	GTC
                   c      GCCA ttcctagccc
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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