The detailed information of tRNA gene sequence


Sequence ID>C161040221
Genome IDCP012156
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHyphomonadaceae bacterium UKL13-1 [CP012156]
Start position on genome 1564372
End posion on genome 1564296
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcccgcctct
tRNA gene sequence 
CGGGGAGTAGCGCAGTTTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
tttttggtcg
Secondary structure (Cloverleaf model)
>C161040221	Pro	TGG
                   t      ACCA tttttggtcg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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