The detailed information of tRNA gene sequence


Sequence ID>C161041354
Genome IDCP012365
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesThiopseudomonas alkaliphila E5571 [CP012365]
Start position on genome 340237
End posion on genome 340313
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taatggtcgg
tRNA gene sequence 
CGCGGGATGGAGCAGCTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCAGTTCAAA
TCTGGCTCCCGCAACCA
Downstream region at tRNA end position 
aacaaacaaa
Secondary structure (Cloverleaf model)
>C161041354	Met	CAT
                   g      ACCA aacaaacaaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G G T C     A
      C G A        G      | + | | |     A
    T       C G A G       G T C A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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