The detailed information of tRNA gene sequence


Sequence ID>C161042058
Genome IDCP012413
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPiscirickettsia salmonis PM15972A1 [CP012413]
Start position on genome 1663664
End posion on genome 1663575
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgagtcgct
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTGAAACCAGTTCCCTGCTAAGGAACCGTATGCTAAAGCGTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
cgttaatcga
Secondary structure (Cloverleaf model)
>C161042058	Ser	GCT
                   t      GCCA cgttaatcga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTATGCTAAAGCGTACC
                    G - C
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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