The detailed information of tRNA gene sequence


Sequence ID>C161043387
Genome IDCP012665
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesCandidatus Xiphinematobacter sp. Idaho Grape [CP012665]
Start position on genome 210583
End posion on genome 210658
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cctggtgaaT
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGGAGGTTCAAA
TCCTCTCCCCGCAAAta
Downstream region at tRNA end position 
tgcctcttgt
Secondary structure (Cloverleaf model)
>C161043387	Met	CAT
                   T      AAta tgcctcttgt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     A
    C       C G A G       G G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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