The detailed information of tRNA gene sequence


Sequence ID>C161043420
Genome IDCP012665
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesCandidatus Xiphinematobacter sp. Idaho Grape [CP012665]
Start position on genome 294007
End posion on genome 293922
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaagtggatg
tRNA gene sequence 
GGATGGGTGACAGAGCGGTTTATTGTGCACGCCTGGAAAGTGTGTGTGCCTTATCGGCAC
CGGGAGTTCGAATCTCCCCCCATCCGtga
Downstream region at tRNA end position 
gcactaccat
Secondary structure (Cloverleaf model)
>C161043420	Ser	GGA
                   g      Gtga gcactaccat
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C C C T C     A
      C G A        G      | | | | |     G
    G       G A C A       G G G A G     C
    G       + | | |                 T T
    T       T T G T
      T T A        G     TGTGCCTTATCGGCACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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