The detailed information of tRNA gene sequence


Sequence ID>C161043425
Genome IDCP012665
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesCandidatus Xiphinematobacter sp. Idaho Grape [CP012665]
Start position on genome 179909
End posion on genome 179835
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cagggtcgag
tRNA gene sequence 
GGAGCCTTAGCTCAACTGGTAAGAGCGCTGCCCTGTCACGGCAGAGGTTGCGGGTTCGAG
CCCCGTAGGCTCCGCat
Downstream region at tRNA end position 
ggggtgagac
Secondary structure (Cloverleaf model)
>C161043425	Asp	GTC
                   g      GCat ggggtgagac
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     T - A          C G
                    T     T G C C C     A
      C A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A A        G     AGGTT
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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